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NIfTI Dataset Documentation
Home
Installation and Import
Package Functions
Analysis
compare_volumes
compare_volumes_dataset
compute_volume_statistics
compute_volume_statistics_dataset
split_dataset
Draw
draw_3D_boxes
draw_2D_annotations
from_2D_to_3D_coords
Preprocessing
skull_CTA
skull_CTA_dataset
mip
mip_dataset
resampling
resampling_dataset
register_CTA
register_CTA_dataset
register_mask
register_mask_dataset
register_annotation
register_annotation_dataset
Slices
extract_slices
extract_slices_dataset
extract_annotations
extract_annotations_dataset
Transforms
intensity_normalization
intensity_normalization_dataset
windowing
windowing_dataset
resample_to_reference
resample_to_reference_dataset
apply_transform
nifti_to_numpy
numpy_to_nifti
Utility
dataset_images_info
dataset_annotations_info
Visualization
overlay_mask_on_volume
overlay_mask_on_volume_dataset
create_slice_montage
Volume
swap_nifti_views
extract_bounding_boxes
extract_bounding_boxes_dataset
generate_brain_mask
generate_brain_mask_dataset
crop_and_pad
crop_and_pad_dataset
generate_heatmap_volume
Quality Control (qc)
check_volume
check_pair
check_triple
check_dataset
thumbnail_grid
QCConfig
niqc CLI
Quick Operations (nii)
rotate_volume
rotate_volume_dataset
flip_volume
flip_volume_dataset
crop_volume
crop_to_content
crop_to_content_dataset
rescale_intensity
rescale_intensity_dataset
dicom_to_nifti
nifti_to_dicom
nii CLI
Search NIfTI Dataset Documentation
Package Functions
Visualization
Visualization
Functions from
nidataset.visualization
.
Table of contents
overlay_mask_on_volume
overlay_mask_on_volume_dataset
create_slice_montage